Praxis Medical Insights

Est. 2024 • Clinical Guidelines Distilled

Made possible by volunteer editors from the University of Calgary & University of Alberta

Last Updated: 10/1/2025

Management of Influenza in COVID-19 Positive Patients

Diagnosis and Treatment

  • The American College of Physicians recommends testing for influenza coinfection using PCR or rapid testing of nasopharyngeal secretions when influenza is clinically suspected in any COVID-19 positive patient, as coinfection rates of 0.5-2% have been documented 1
  • For confirmed influenza coinfection, administer oseltamivir or baloxavir according to standard influenza treatment guidelines, and continue COVID-19 specific therapies concurrently without modification 1
  • Consider empirical antibiotics if bacterial superinfection cannot be ruled out, as bacterial coinfection occurs in approximately 40% of viral respiratory infections requiring hospitalization 2, 3

Treatment Considerations

  • Maintain bispecific antibody or immunosuppressive dosing during influenza prophylaxis if the patient is on such therapies 1
  • Monitor for drug interactions, particularly if the patient is on multiple medications 5
  • Follow standard isolation protocols for both infections until clinical resolution 1

Prevention

  • Influenza vaccination is strongly recommended for all COVID-19 patients and their close contacts to reduce the risk of coinfection and simplify clinical management 1, 7
  • Paracetamol is preferred over NSAIDs for fever management in COVID-19 until more evidence is available 6